Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc7Q9D541 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Gm24589-201ENSMUST00000116692 94 ntBASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Gm7862-201ENSMUST00000121461 292 ntBASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Gm4899-201ENSMUST00000178708 719 ntBASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Gm45167-201ENSMUST00000208007 322 ntBASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc7Q9D541 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Gm7787-201ENSMUST00000216858 688 ntBASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Gm18246-201ENSMUST00000221023 728 ntBASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc7Q9D541 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.52■□□□□ 0.4
Ccdc7Q9D541 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms