Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ssu72Q9CY97 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Gm10499-201ENSMUST00000174094 934 ntBASIC14.9□□□□□ -0.02
Ssu72Q9CY97 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ssu72Q9CY97 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Gm7506-201ENSMUST00000207758 815 ntBASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ssu72Q9CY97 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ssu72Q9CY97 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ssu72Q9CY97 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms