Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm12895-201ENSMUST00000122214 226 ntBASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ssr1Q9CY50 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Gm12644-201ENSMUST00000119935 606 ntBASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Gm17807-201ENSMUST00000186869 298 ntBASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ssr1Q9CY50 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Gm8344-201ENSMUST00000119813 856 ntBASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ssr1Q9CY50 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gm27357-201ENSMUST00000183754 135 ntBASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gm8655-201ENSMUST00000221159 852 ntBASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ssr1Q9CY50 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms