Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx28Q9CWT6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx28Q9CWT6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx28Q9CWT6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm8825-201ENSMUST00000182565 998 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm4518-201ENSMUST00000182638 718 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm28033-201ENSMUST00000184224 96 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ddx28Q9CWT6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms