Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.64■□□□□ 0.09
Rnf135Q9CWS1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rnf135Q9CWS1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Mir5126-201ENSMUST00000175513 77 ntBASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rnf135Q9CWS1 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rnf135Q9CWS1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf135Q9CWS1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf135Q9CWS1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf135Q9CWS1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rnf135Q9CWS1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms