Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm12892-201ENSMUST00000117367 1146 ntBASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm13365-201ENSMUST00000121188 973 ntBASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Prob1-201ENSMUST00000097619 3021 ntBASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm13337-201ENSMUST00000119183 1594 ntBASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm7901-201ENSMUST00000120430 1597 ntBASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm5184-201ENSMUST00000220417 1702 ntBASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Sec61bQ9CQS8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 AC153936.1-201ENSMUST00000219874 395 ntBASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 AC131710.1-201ENSMUST00000228336 990 ntBASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Sec61bQ9CQS8 Gm38327-201ENSMUST00000195852 1755 ntBASIC8.07□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms