Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Chchd1Q9CQA6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gm7290-201ENSMUST00000104990 617 ntBASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gm12821-201ENSMUST00000120022 600 ntBASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gm12918-201ENSMUST00000120234 636 ntBASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gm15710-201ENSMUST00000121821 636 ntBASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gm5075-201ENSMUST00000196916 622 ntBASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chchd1Q9CQA6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Gm21956-201ENSMUST00000179946 522 ntBASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Gm37292-201ENSMUST00000192062 758 ntBASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Gm44450-201ENSMUST00000199528 114 ntBASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chchd1Q9CQA6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Chchd1Q9CQA6 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Chchd1Q9CQA6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.33□□□□□ -0.59
Chchd1Q9CQA6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chchd1Q9CQA6 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms