Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb1Q9CQ70 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm25990-201ENSMUST00000102440 86 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm21362-201ENSMUST00000194272 928 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44357-201ENSMUST00000195897 142 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm19658-201ENSMUST00000196231 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44367-201ENSMUST00000196836 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44350-201ENSMUST00000197197 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44390-201ENSMUST00000197533 144 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44313-201ENSMUST00000198018 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44486-201ENSMUST00000198508 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44314-201ENSMUST00000199263 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44394-201ENSMUST00000199558 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44484-201ENSMUST00000199873 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44466-201ENSMUST00000200264 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm44359-201ENSMUST00000200671 138 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afb1Q9CQ70 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Gm7222-201ENSMUST00000117512 906 ntBASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Gm9682-201ENSMUST00000197505 556 ntBASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb1Q9CQ70 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb1Q9CQ70 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms