Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Trim33Q99PP7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim33Q99PP7 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.89□□□□□ -0.03
Trim33Q99PP7 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gm4899-201ENSMUST00000178708 719 ntBASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.89□□□□□ -0.03
Trim33Q99PP7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim33Q99PP7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trim33Q99PP7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.88□□□□□ -0.03
Trim33Q99PP7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.88□□□□□ -0.03
Trim33Q99PP7 Gm44771-201ENSMUST00000206975 626 ntBASIC14.88□□□□□ -0.03
Trim33Q99PP7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.88□□□□□ -0.03
Trim33Q99PP7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim33Q99PP7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim33Q99PP7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms