Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Gm12341-201ENSMUST00000119724 503 ntBASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh23Q99PF4 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Gm27572-201ENSMUST00000183702 255 ntBASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Gm7561-201ENSMUST00000211203 886 ntBASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh23Q99PF4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cdh23Q99PF4 Mir8109-201ENSMUST00000184375 117 ntBASIC15.08■□□□□ 0
Cdh23Q99PF4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cdh23Q99PF4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.08■□□□□ 0
Cdh23Q99PF4 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.08■□□□□ 0
Cdh23Q99PF4 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh23Q99PF4 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.08■□□□□ 0
Cdh23Q99PF4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cdh23Q99PF4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.07■□□□□ 0
Cdh23Q99PF4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.07■□□□□ 0
Cdh23Q99PF4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Gm37466-201ENSMUST00000195692 652 ntBASIC15.07■□□□□ 0
Cdh23Q99PF4 Gm19220-201ENSMUST00000222682 803 ntBASIC15.07■□□□□ 0
Cdh23Q99PF4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.07■□□□□ 0
Cdh23Q99PF4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cdh23Q99PF4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Gm18222-201ENSMUST00000202416 1387 ntBASIC15.07■□□□□ 0
Cdh23Q99PF4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.07■□□□□ 0
Cdh23Q99PF4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.07■□□□□ 0
Cdh23Q99PF4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.07■□□□□ 0
Cdh23Q99PF4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cdh23Q99PF4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC15.06■□□□□ 0
Cdh23Q99PF4 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Gm14723-201ENSMUST00000118686 215 ntBASIC15.06■□□□□ 0
Cdh23Q99PF4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cdh23Q99PF4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.06■□□□□ 0
Cdh23Q99PF4 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cdh23Q99PF4 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.05■□□□□ 0
Cdh23Q99PF4 Gm27731-201ENSMUST00000185192 107 ntBASIC15.05■□□□□ 0
Cdh23Q99PF4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms