Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Col25a1Q99MQ5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Col25a1Q99MQ5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Gm22189-201ENSMUST00000103822 86 ntBASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Gm10154-201ENSMUST00000084445 354 ntBASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Col25a1Q99MQ5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Gm13015-201ENSMUST00000118674 204 ntBASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Gm27243-201ENSMUST00000183964 521 ntBASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Gm18049-201ENSMUST00000208909 581 ntBASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Col25a1Q99MQ5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Gm2272-201ENSMUST00000194903 582 ntBASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Gm20445-201ENSMUST00000061905 565 ntBASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Col25a1Q99MQ5 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms