Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdca3Q99M54 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdca3Q99M54 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdca3Q99M54 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.95□□□□□ -0.18
Cdca3Q99M54 Gm44872-201ENSMUST00000207864 420 ntBASIC13.95□□□□□ -0.18
Cdca3Q99M54 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdca3Q99M54 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.94□□□□□ -0.18
Cdca3Q99M54 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.94□□□□□ -0.18
Cdca3Q99M54 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.94□□□□□ -0.18
Cdca3Q99M54 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdca3Q99M54 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdca3Q99M54 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.93□□□□□ -0.18
Cdca3Q99M54 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.93□□□□□ -0.18
Cdca3Q99M54 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdca3Q99M54 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdca3Q99M54 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdca3Q99M54 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdca3Q99M54 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.93□□□□□ -0.18
Cdca3Q99M54 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.93□□□□□ -0.18
Cdca3Q99M54 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.93□□□□□ -0.18
Cdca3Q99M54 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.93□□□□□ -0.18
Cdca3Q99M54 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms