Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Clp1Q99LI9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.76■□□□□ 0.11
Clp1Q99LI9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm29310-201ENSMUST00000185468 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21825-201ENSMUST00000185728 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm29109-201ENSMUST00000185895 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21896-201ENSMUST00000186520 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21873-201ENSMUST00000186728 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21794-201ENSMUST00000187056 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21880-201ENSMUST00000187275 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21826-201ENSMUST00000187451 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21198-201ENSMUST00000188393 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21749-201ENSMUST00000189343 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21901-201ENSMUST00000189568 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm29424-201ENSMUST00000189716 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm28599-201ENSMUST00000189838 694 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21867-201ENSMUST00000189917 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm29269-201ENSMUST00000190087 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21722-201ENSMUST00000190153 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm28423-201ENSMUST00000190701 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21899-201ENSMUST00000190745 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21910-201ENSMUST00000191163 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21849-201ENSMUST00000191571 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm28678-201ENSMUST00000191593 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm20910-201ENSMUST00000193268 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm21871-201ENSMUST00000194621 696 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm8515-201ENSMUST00000194852 576 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm46209-201ENSMUST00000217912 553 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.75■□□□□ 0.11
Clp1Q99LI9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Clp1Q99LI9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Clp1Q99LI9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Gm3436-201ENSMUST00000179930 840 ntBASIC15.74■□□□□ 0.11
Clp1Q99LI9 Dupd1-202ENSMUST00000224735 548 ntBASIC15.74■□□□□ 0.11
Clp1Q99LI9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Gm6180-201ENSMUST00000065243 498 ntBASIC15.74■□□□□ 0.11
Clp1Q99LI9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Clp1Q99LI9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms