Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hps4Q99KG7 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.58■□□□□ 0.41
Hps4Q99KG7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.58■□□□□ 0.41
Hps4Q99KG7 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Gm17837-201ENSMUST00000186435 985 ntBASIC17.58■□□□□ 0.4
Hps4Q99KG7 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.58■□□□□ 0.4
Hps4Q99KG7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Hps4Q99KG7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Gm8410-201ENSMUST00000117225 605 ntBASIC17.57■□□□□ 0.4
Hps4Q99KG7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Rbfox2-208ENSMUST00000227930 1218 ntBASIC17.57■□□□□ 0.4
Hps4Q99KG7 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hps4Q99KG7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.56■□□□□ 0.4
Hps4Q99KG7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.56■□□□□ 0.4
Hps4Q99KG7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.56■□□□□ 0.4
Hps4Q99KG7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Hps4Q99KG7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hps4Q99KG7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.55■□□□□ 0.4
Hps4Q99KG7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.55■□□□□ 0.4
Hps4Q99KG7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Hps4Q99KG7 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hps4Q99KG7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms