Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.16■□□□□ 0.02
Cdk9Q99J95 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Mir770-201ENSMUST00000103252 94 ntBASIC15.16■□□□□ 0.02
Cdk9Q99J95 Gm33142-201ENSMUST00000193913 867 ntBASIC15.16■□□□□ 0.02
Cdk9Q99J95 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.16■□□□□ 0.02
Cdk9Q99J95 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.16■□□□□ 0.02
Cdk9Q99J95 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cdk9Q99J95 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Gm21362-201ENSMUST00000194272 928 ntBASIC15.15■□□□□ 0.02
Cdk9Q99J95 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.15■□□□□ 0.02
Cdk9Q99J95 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdk9Q99J95 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Gm23547-201ENSMUST00000158210 271 ntBASIC15.14■□□□□ 0.01
Cdk9Q99J95 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.14■□□□□ 0.01
Cdk9Q99J95 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.14■□□□□ 0.01
Cdk9Q99J95 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdk9Q99J95 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.13■□□□□ 0.01
Cdk9Q99J95 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdk9Q99J95 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms