Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfc4Q99J62 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Gm7488-201ENSMUST00000117148 684 ntBASIC17.24■□□□□ 0.35
Rfc4Q99J62 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Gm9063-201ENSMUST00000223299 582 ntBASIC17.24■□□□□ 0.35
Rfc4Q99J62 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfc4Q99J62 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.23■□□□□ 0.35
Rfc4Q99J62 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.23■□□□□ 0.35
Rfc4Q99J62 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfc4Q99J62 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.22■□□□□ 0.35
Rfc4Q99J62 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Gm16215-201ENSMUST00000161990 637 ntBASIC17.22■□□□□ 0.35
Rfc4Q99J62 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.22■□□□□ 0.35
Rfc4Q99J62 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.22■□□□□ 0.35
Rfc4Q99J62 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfc4Q99J62 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfc4Q99J62 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms