Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.68■□□□□ 0.42
Col20a1Q923P0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.68■□□□□ 0.42
Col20a1Q923P0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Col20a1Q923P0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.67■□□□□ 0.42
Col20a1Q923P0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col20a1Q923P0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.66■□□□□ 0.42
Col20a1Q923P0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Col20a1Q923P0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.66■□□□□ 0.42
Col20a1Q923P0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.66■□□□□ 0.42
Col20a1Q923P0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col20a1Q923P0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col20a1Q923P0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Gm18049-201ENSMUST00000208909 581 ntBASIC17.65■□□□□ 0.42
Col20a1Q923P0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col20a1Q923P0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col20a1Q923P0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.64■□□□□ 0.41
Col20a1Q923P0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col20a1Q923P0 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms