Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb6Q91XZ4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
Pcdhb6Q91XZ4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb6Q91XZ4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhb6Q91XZ4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhb6Q91XZ4 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Gm2272-201ENSMUST00000194903 582 ntBASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Pcdhb6Q91XZ4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb6Q91XZ4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Psmb5-202ENSMUST00000227257 622 ntBASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb6Q91XZ4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms