Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga3Q91XY5 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Grk6-207ENSMUST00000225925 2769 ntBASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gm27646-201ENSMUST00000183989 110 ntBASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga3Q91XY5 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhga3Q91XY5 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.4□□□□□ -0.27
Pcdhga3Q91XY5 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Gm25990-201ENSMUST00000102440 86 ntBASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Gm6089-201ENSMUST00000197666 938 ntBASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.39□□□□□ -0.27
Pcdhga3Q91XY5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Mir8098-201ENSMUST00000184011 137 ntBASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.38□□□□□ -0.27
Pcdhga3Q91XY5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms