Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Gm6257-201ENSMUST00000163864 910 ntBASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Rpph1-201ENSMUST00000175096 319 ntBASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc5Q91XW9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Gm5745-201ENSMUST00000183748 313 ntBASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhgc5Q91XW9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Gm27622-201ENSMUST00000183779 60 ntBASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhgc5Q91XW9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Pcdhgc5Q91XW9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhgc5Q91XW9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.08■□□□□ 0.32
Pcdhgc5Q91XW9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms