Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.29■□□□□ 0.04
Lims2Q91XD2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.29■□□□□ 0.04
Lims2Q91XD2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lims2Q91XD2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lims2Q91XD2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Lims2Q91XD2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lims2Q91XD2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Lims2Q91XD2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lims2Q91XD2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.28■□□□□ 0.04
Lims2Q91XD2 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.28■□□□□ 0.04
Lims2Q91XD2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lims2Q91XD2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Gm9726-201ENSMUST00000180321 678 ntBASIC15.27■□□□□ 0.04
Lims2Q91XD2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Gm38225-201ENSMUST00000194001 393 ntBASIC15.27■□□□□ 0.04
Lims2Q91XD2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Lims2Q91XD2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lims2Q91XD2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lims2Q91XD2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lims2Q91XD2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.27■□□□□ 0.03
Lims2Q91XD2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lims2Q91XD2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lims2Q91XD2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.26■□□□□ 0.03
Lims2Q91XD2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Gm14701-201ENSMUST00000117156 348 ntBASIC15.26■□□□□ 0.03
Lims2Q91XD2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Gm45098-201ENSMUST00000207179 657 ntBASIC15.26■□□□□ 0.03
Lims2Q91XD2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.26■□□□□ 0.03
Lims2Q91XD2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Lims2Q91XD2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lims2Q91XD2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.25■□□□□ 0.03
Lims2Q91XD2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lims2Q91XD2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lims2Q91XD2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lims2Q91XD2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lims2Q91XD2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms