Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb17Q91VD8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Gm37684-201ENSMUST00000192779 355 ntBASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb17Q91VD8 Gm28359-201ENSMUST00000187470 1322 ntBASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Celf4-206ENSMUST00000224553 1729 ntBASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Gm11779-201ENSMUST00000118541 368 ntBASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb17Q91VD8 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Gm15061-201ENSMUST00000121076 1046 ntBASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Gm8000-201ENSMUST00000188378 592 ntBASIC15.67■□□□□ 0.1
Pcdhb17Q91VD8 Gm29011-201ENSMUST00000191059 712 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms