Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TraipQ8VIG6 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TraipQ8VIG6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.94■□□□□ 0.14
TraipQ8VIG6 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TraipQ8VIG6 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.94■□□□□ 0.14
TraipQ8VIG6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 App-207ENSMUST00000227737 2827 ntBASIC15.93■□□□□ 0.14
TraipQ8VIG6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TraipQ8VIG6 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Gm5779-201ENSMUST00000218467 910 ntBASIC15.93■□□□□ 0.14
TraipQ8VIG6 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.93■□□□□ 0.14
TraipQ8VIG6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TraipQ8VIG6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Gm29541-201ENSMUST00000191351 678 ntBASIC15.92■□□□□ 0.14
TraipQ8VIG6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.92■□□□□ 0.14
TraipQ8VIG6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
TraipQ8VIG6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TraipQ8VIG6 Gm13015-201ENSMUST00000118674 204 ntBASIC15.91■□□□□ 0.14
TraipQ8VIG6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms