Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Mir5126-201ENSMUST00000175513 77 ntBASIC13.48□□□□□ -0.25
Odf4Q8VI88 Gm8655-201ENSMUST00000221159 852 ntBASIC13.48□□□□□ -0.25
Odf4Q8VI88 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.48□□□□□ -0.25
Odf4Q8VI88 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Odf4Q8VI88 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.47□□□□□ -0.25
Odf4Q8VI88 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gm11594-201ENSMUST00000122313 162 ntBASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gm7230-201ENSMUST00000173026 815 ntBASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gm8000-201ENSMUST00000188378 592 ntBASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gm9172-201ENSMUST00000212092 954 ntBASIC13.47□□□□□ -0.25
Odf4Q8VI88 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gm15590-201ENSMUST00000078419 552 ntBASIC13.47□□□□□ -0.25
Odf4Q8VI88 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.47□□□□□ -0.25
Odf4Q8VI88 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Odf4Q8VI88 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Gm37935-201ENSMUST00000192012 982 ntBASIC13.46□□□□□ -0.25
Odf4Q8VI88 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Odf4Q8VI88 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.46□□□□□ -0.26
Odf4Q8VI88 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.46□□□□□ -0.26
Odf4Q8VI88 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms