Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.16■□□□□ 0.02
Rpa1Q8VEE4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa1Q8VEE4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rpa1Q8VEE4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.16■□□□□ 0.02
Rpa1Q8VEE4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm8825-201ENSMUST00000182565 998 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm4518-201ENSMUST00000182638 718 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rpa1Q8VEE4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Gm10013-201ENSMUST00000106074 672 ntBASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rpa1Q8VEE4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Gm23547-201ENSMUST00000158210 271 ntBASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Gm18032-201ENSMUST00000222541 538 ntBASIC15.13■□□□□ 0.01
Rpa1Q8VEE4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms