Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Asic1-205ENSMUST00000228185 1818 ntBASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retreg1dQ8VE91 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Gm23935-201ENSMUST00000102303 57 ntBASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Gm24270-201ENSMUST00000102326 57 ntBASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Gm24245-201ENSMUST00000157318 57 ntBASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Retreg1dQ8VE91 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Gm13597-201ENSMUST00000121239 375 ntBASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Retreg1dQ8VE91 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Gm17271-201ENSMUST00000165535 355 ntBASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.88□□□□□ -0.03
Retreg1dQ8VE91 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms