Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm11543-201ENSMUST00000120758 370 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm25349-201ENSMUST00000177728 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm23616-201ENSMUST00000177797 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm25871-201ENSMUST00000177816 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24752-201ENSMUST00000178240 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24496-201ENSMUST00000178287 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm25649-201ENSMUST00000178476 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm25548-201ENSMUST00000178681 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm23147-201ENSMUST00000178841 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm26095-201ENSMUST00000179270 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm22171-201ENSMUST00000179283 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm23936-201ENSMUST00000179354 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm22619-201ENSMUST00000179516 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm25255-201ENSMUST00000179579 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24755-201ENSMUST00000179691 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm26506-201ENSMUST00000179692 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm25086-201ENSMUST00000179931 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm23243-201ENSMUST00000180047 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24659-201ENSMUST00000180212 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm24169-201ENSMUST00000180244 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm23689-201ENSMUST00000180354 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm27359-201ENSMUST00000184153 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm27785-201ENSMUST00000184268 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm27466-201ENSMUST00000184396 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm27703-201ENSMUST00000184836 110 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx39aQ8VDW0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ddx39aQ8VDW0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ddx39aQ8VDW0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ddx39aQ8VDW0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Gm5779-201ENSMUST00000218467 910 ntBASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx39aQ8VDW0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Celf4-206ENSMUST00000224553 1729 ntBASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx39aQ8VDW0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx39aQ8VDW0 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx39aQ8VDW0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx39aQ8VDW0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx39aQ8VDW0 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx39aQ8VDW0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx39aQ8VDW0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms