Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Dnajc28Q8VCE1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Dnajc28Q8VCE1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Gm12008-201ENSMUST00000117791 755 ntBASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 AA543401-201ENSMUST00000164248 1269 ntBASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Gm20553-201ENSMUST00000204205 844 ntBASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Dnajc28Q8VCE1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Rprl2-201ENSMUST00000157150 290 ntBASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Gm8318-201ENSMUST00000182954 872 ntBASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.37■□□□□ 0.21
Dnajc28Q8VCE1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.36■□□□□ 0.21
Dnajc28Q8VCE1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms