Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm15427-201ENSMUST00000117288 531 ntBASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Thap2-203ENSMUST00000218989 527 ntBASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ndc1Q8VCB1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Gm12008-201ENSMUST00000117791 755 ntBASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ndc1Q8VCB1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Gm27494-201ENSMUST00000184735 189 ntBASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ndc1Q8VCB1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ndc1Q8VCB1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms