Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm6089-201ENSMUST00000197666 938 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm1Q8VC85 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm1Q8VC85 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gm25990-201ENSMUST00000102440 86 ntBASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gm5682-201ENSMUST00000173402 505 ntBASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gm37153-201ENSMUST00000193637 231 ntBASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gm7977-201ENSMUST00000193787 748 ntBASIC14.39□□□□□ -0.11
Lsm1Q8VC85 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm1Q8VC85 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms