Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Cdt1Q8R4E9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Cdt1Q8R4E9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Cdt1Q8R4E9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.53□□□□□ -0.08
Cdt1Q8R4E9 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdt1Q8R4E9 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms