Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Gm13474-201ENSMUST00000122466 815 ntBASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Mypopos-202ENSMUST00000205975 2321 ntBASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim2Q8R1G6 Gm42928-201ENSMUST00000197338 3339 ntBASIC17.21■□□□□ 0.34
Pdlim2Q8R1G6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pdlim2Q8R1G6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim2Q8R1G6 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Gm16061-201ENSMUST00000122167 857 ntBASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Gm25406-201ENSMUST00000157599 105 ntBASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Gm18041-201ENSMUST00000218210 618 ntBASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim2Q8R1G6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim2Q8R1G6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pdlim2Q8R1G6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms