Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cystm1Q8K353 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Gm17808-201ENSMUST00000200859 894 ntBASIC9.46□□□□□ -0.9
Cystm1Q8K353 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cystm1Q8K353 AC154471.1-201ENSMUST00000224418 436 ntBASIC9.46□□□□□ -0.9
Cystm1Q8K353 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Gm10819-201ENSMUST00000099988 561 ntBASIC9.46□□□□□ -0.9
Cystm1Q8K353 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.46□□□□□ -0.9
Cystm1Q8K353 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC9.46□□□□□ -0.9
Cystm1Q8K353 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC9.46□□□□□ -0.9
Cystm1Q8K353 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cystm1Q8K353 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gm14780-201ENSMUST00000118387 2737 ntBASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gm27357-201ENSMUST00000183754 135 ntBASIC9.45□□□□□ -0.9
Cystm1Q8K353 Ank2-226ENSMUST00000189368 339 ntBASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gm37722-201ENSMUST00000193757 208 ntBASIC9.45□□□□□ -0.9
Cystm1Q8K353 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.45□□□□□ -0.9
Cystm1Q8K353 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cystm1Q8K353 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cystm1Q8K353 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms