Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rtn1Q8K0T0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rtn1Q8K0T0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Gm11779-201ENSMUST00000118541 368 ntBASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Gm17968-201ENSMUST00000194902 784 ntBASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.3■□□□□ 0.36
Rtn1Q8K0T0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Thap2-203ENSMUST00000218989 527 ntBASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rtn1Q8K0T0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Efs-202ENSMUST00000227037 2540 ntBASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms