Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Gm15653-201ENSMUST00000119247 907 ntBASIC16.9■□□□□ 0.3
Syne4Q8CII8 Gm14042-201ENSMUST00000120139 833 ntBASIC16.9■□□□□ 0.3
Syne4Q8CII8 Gm12091-201ENSMUST00000146791 830 ntBASIC16.9■□□□□ 0.3
Syne4Q8CII8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Syne4Q8CII8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Syne4Q8CII8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Syne4Q8CII8 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Gm18018-201ENSMUST00000198273 408 ntBASIC16.89■□□□□ 0.29
Syne4Q8CII8 Gm9908-201ENSMUST00000211534 448 ntBASIC16.89■□□□□ 0.29
Syne4Q8CII8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Gm16476-201ENSMUST00000221544 139 ntBASIC16.89■□□□□ 0.29
Syne4Q8CII8 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Celf4-206ENSMUST00000224553 1729 ntBASIC16.89■□□□□ 0.29
Syne4Q8CII8 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Syne4Q8CII8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.88■□□□□ 0.29
Syne4Q8CII8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Syne4Q8CII8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm3436-201ENSMUST00000179930 840 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm29310-201ENSMUST00000185468 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21825-201ENSMUST00000185728 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm29109-201ENSMUST00000185895 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21896-201ENSMUST00000186520 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21873-201ENSMUST00000186728 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21794-201ENSMUST00000187056 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21880-201ENSMUST00000187275 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21826-201ENSMUST00000187451 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21198-201ENSMUST00000188393 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21749-201ENSMUST00000189343 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21901-201ENSMUST00000189568 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm29424-201ENSMUST00000189716 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm28599-201ENSMUST00000189838 694 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm21867-201ENSMUST00000189917 696 ntBASIC16.87■□□□□ 0.29
Syne4Q8CII8 Gm29269-201ENSMUST00000190087 696 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms