Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Clip4Q8CI96 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Gm43514-201ENSMUST00000198852 424 ntBASIC15.15■□□□□ 0.02
Clip4Q8CI96 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Clip4Q8CI96 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Clip4Q8CI96 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.13■□□□□ 0.01
Clip4Q8CI96 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.13■□□□□ 0.01
Clip4Q8CI96 Gm1401-201ENSMUST00000122048 772 ntBASIC15.13■□□□□ 0.01
Clip4Q8CI96 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 AW822252-206ENSMUST00000208904 237 ntBASIC15.13■□□□□ 0.01
Clip4Q8CI96 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Gm19164-201ENSMUST00000210667 640 ntBASIC15.13■□□□□ 0.01
Clip4Q8CI96 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Gm15590-201ENSMUST00000078419 552 ntBASIC15.13■□□□□ 0.01
Clip4Q8CI96 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Clip4Q8CI96 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 Gm18206-201ENSMUST00000207027 926 ntBASIC15.12■□□□□ 0.01
Clip4Q8CI96 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Clip4Q8CI96 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms