Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rab11fip3Q8CHD8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Ptprs-211ENSMUST00000223859 5588 ntBASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Gm8116-201ENSMUST00000182917 1201 ntBASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Gm5779-201ENSMUST00000218467 910 ntBASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rab11fip3Q8CHD8 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Asic1-205ENSMUST00000228185 1818 ntBASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Gm6539-201ENSMUST00000119157 1064 ntBASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rab11fip3Q8CHD8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Mir7023-201ENSMUST00000185093 64 ntBASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rab11fip3Q8CHD8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms