Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Gm14859-201ENSMUST00000117752 357 ntBASIC13.4□□□□□ -0.26
ShfQ8CG80 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.4□□□□□ -0.26
ShfQ8CG80 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ShfQ8CG80 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ShfQ8CG80 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ShfQ8CG80 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Carlr-201ENSMUST00000181515 2574 ntBASIC13.39□□□□□ -0.27
ShfQ8CG80 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.39□□□□□ -0.27
ShfQ8CG80 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.39□□□□□ -0.27
ShfQ8CG80 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.39□□□□□ -0.27
ShfQ8CG80 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ShfQ8CG80 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.39□□□□□ -0.27
ShfQ8CG80 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.38□□□□□ -0.27
ShfQ8CG80 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.38□□□□□ -0.27
ShfQ8CG80 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Gm17807-201ENSMUST00000186869 298 ntBASIC13.38□□□□□ -0.27
ShfQ8CG80 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.38□□□□□ -0.27
ShfQ8CG80 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.38□□□□□ -0.27
ShfQ8CG80 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ShfQ8CG80 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.38□□□□□ -0.27
ShfQ8CG80 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ShfQ8CG80 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ShfQ8CG80 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.37□□□□□ -0.27
ShfQ8CG80 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ShfQ8CG80 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ShfQ8CG80 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.37□□□□□ -0.27
ShfQ8CG80 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
ShfQ8CG80 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms