Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm25287-201ENSMUST00000103846 110 ntBASIC18.46■□□□□ 0.55
Smc4Q8CG47 Gm22918-201ENSMUST00000103855 110 ntBASIC18.46■□□□□ 0.55
Smc4Q8CG47 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smc4Q8CG47 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Smc4Q8CG47 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Smc4Q8CG47 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
Smc4Q8CG47 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.45■□□□□ 0.54
Smc4Q8CG47 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC18.45■□□□□ 0.54
Smc4Q8CG47 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Smc4Q8CG47 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.44■□□□□ 0.54
Smc4Q8CG47 Gm24158-201ENSMUST00000175263 71 ntBASIC18.44■□□□□ 0.54
Smc4Q8CG47 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.44■□□□□ 0.54
Smc4Q8CG47 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Smc4Q8CG47 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Smc4Q8CG47 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm22065-201ENSMUST00000103753 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm22066-201ENSMUST00000103761 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24932-201ENSMUST00000103763 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24115-201ENSMUST00000103799 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm22190-201ENSMUST00000103827 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm22191-201ENSMUST00000103831 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24721-201ENSMUST00000103849 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm28018-201ENSMUST00000103869 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm26399-201ENSMUST00000103937 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm2810-201ENSMUST00000118681 990 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm25349-201ENSMUST00000177728 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm23616-201ENSMUST00000177797 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm25871-201ENSMUST00000177816 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24752-201ENSMUST00000178240 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm24496-201ENSMUST00000178287 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm25649-201ENSMUST00000178476 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm25548-201ENSMUST00000178681 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm23147-201ENSMUST00000178841 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm26095-201ENSMUST00000179270 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm22171-201ENSMUST00000179283 110 ntBASIC18.43■□□□□ 0.54
Smc4Q8CG47 Gm23936-201ENSMUST00000179354 110 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms