Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Fam228aQ8CDW1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Gm15165-201ENSMUST00000118140 502 ntBASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Olfr129-201ENSMUST00000122318 993 ntBASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Gm12497-201ENSMUST00000138778 237 ntBASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Fam228aQ8CDW1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Gm4459-201ENSMUST00000118750 468 ntBASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Gm8318-201ENSMUST00000182954 872 ntBASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Fam228aQ8CDW1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Fam228aQ8CDW1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.77■□□□□ 0.11
Fam228aQ8CDW1 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.76■□□□□ 0.11
Fam228aQ8CDW1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms