Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
Prpf31Q8CCF0 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Gm14701-201ENSMUST00000117156 348 ntBASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Rprl2-201ENSMUST00000157150 290 ntBASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Gm8396-201ENSMUST00000057361 823 ntBASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Prpf31Q8CCF0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Gm18889-201ENSMUST00000174284 929 ntBASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf31Q8CCF0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf31Q8CCF0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms