Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Vps53Q8CCB4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vps53Q8CCB4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Gm11025-201ENSMUST00000140773 466 ntBASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.46■□□□□ 0.39
Vps53Q8CCB4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Gm8344-201ENSMUST00000119813 856 ntBASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Gm17271-201ENSMUST00000165535 355 ntBASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.45■□□□□ 0.38
Vps53Q8CCB4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Gm7229-201ENSMUST00000214719 1007 ntBASIC17.44■□□□□ 0.38
Vps53Q8CCB4 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vps53Q8CCB4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms