Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col6a6Q8C6K9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gm5566-201ENSMUST00000116118 459 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gm4875-201ENSMUST00000118257 786 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gm15483-201ENSMUST00000120338 456 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Gm7775-201ENSMUST00000218871 853 ntBASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col6a6Q8C6K9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Gm9908-201ENSMUST00000211534 448 ntBASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col6a6Q8C6K9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Asic1-205ENSMUST00000228185 1818 ntBASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.49□□□□□ -0.25
Col6a6Q8C6K9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms