Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc60Q8C4J0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc60Q8C4J0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc60Q8C4J0 Efs-202ENSMUST00000227037 2540 ntBASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Gm44492-201ENSMUST00000197012 141 ntBASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc60Q8C4J0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Mir8117-201ENSMUST00000184773 107 ntBASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Gm10175-201ENSMUST00000086013 645 ntBASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Gm10313-201ENSMUST00000095320 1002 ntBASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Mxra8os-201ENSMUST00000097740 687 ntBASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc60Q8C4J0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Gm4995-201ENSMUST00000117247 432 ntBASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc60Q8C4J0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Gm2272-201ENSMUST00000194903 582 ntBASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc60Q8C4J0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms