Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ptcd1Q8C2E4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Gm12490-201ENSMUST00000120255 560 ntBASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ptcd1Q8C2E4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Gm14719-201ENSMUST00000121891 340 ntBASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Gm15487-201ENSMUST00000122373 465 ntBASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Gm43433-201ENSMUST00000196573 481 ntBASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.42■□□□□ 0.54
Ptcd1Q8C2E4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Gm18049-201ENSMUST00000208909 581 ntBASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Gm9063-201ENSMUST00000223299 582 ntBASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ptcd1Q8C2E4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms