Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim47Q8C0E3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim47Q8C0E3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim47Q8C0E3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim47Q8C0E3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms