Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.19■□□□□ 0.02
Sh3rf2Q8BZT2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Gm14057-201ENSMUST00000120631 482 ntBASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Gm38225-201ENSMUST00000194001 393 ntBASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh3rf2Q8BZT2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh3rf2Q8BZT2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh3rf2Q8BZT2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms