Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC21.11■□□□□ 0.97
Usp47Q8BY87 AC139382.1-201ENSMUST00000221402 498 ntBASIC21.11■□□□□ 0.97
Usp47Q8BY87 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 AC154767.3-201ENSMUST00000225150 1342 ntBASIC21.11■□□□□ 0.97
Usp47Q8BY87 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Usp47Q8BY87 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Gm8116-201ENSMUST00000182917 1201 ntBASIC21.1■□□□□ 0.97
Usp47Q8BY87 Gm5779-201ENSMUST00000218467 910 ntBASIC21.1■□□□□ 0.97
Usp47Q8BY87 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Usp47Q8BY87 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Gm7336-201ENSMUST00000107041 1232 ntBASIC21.09■□□□□ 0.97
Usp47Q8BY87 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Gm24158-201ENSMUST00000175263 71 ntBASIC21.09■□□□□ 0.97
Usp47Q8BY87 Mir6956-201ENSMUST00000183598 62 ntBASIC21.09■□□□□ 0.97
Usp47Q8BY87 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Gm38225-201ENSMUST00000194001 393 ntBASIC21.09■□□□□ 0.97
Usp47Q8BY87 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Usp47Q8BY87 CT010478.1-201ENSMUST00000220747 2787 ntBASIC21.08■□□□□ 0.97
Usp47Q8BY87 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp47Q8BY87 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp47Q8BY87 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp47Q8BY87 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Usp47Q8BY87 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Usp47Q8BY87 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Olfr286-202ENSMUST00000205305 969 ntBASIC21.08■□□□□ 0.96
Usp47Q8BY87 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Usp47Q8BY87 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Usp47Q8BY87 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp47Q8BY87 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp47Q8BY87 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp47Q8BY87 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Usp47Q8BY87 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Usp47Q8BY87 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms