Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Gm8318-201ENSMUST00000182954 872 ntBASIC13.26□□□□□ -0.29
SprnQ8BWU1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.26□□□□□ -0.29
SprnQ8BWU1 Grk6-207ENSMUST00000225925 2769 ntBASIC13.26□□□□□ -0.29
SprnQ8BWU1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.26□□□□□ -0.29
SprnQ8BWU1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SprnQ8BWU1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.25□□□□□ -0.29
SprnQ8BWU1 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Gm9172-201ENSMUST00000212092 954 ntBASIC13.25□□□□□ -0.29
SprnQ8BWU1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SprnQ8BWU1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.24□□□□□ -0.29
SprnQ8BWU1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
SprnQ8BWU1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms