Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpsf7Q8BTV2 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpsf7Q8BTV2 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Gm18622-201ENSMUST00000219361 595 ntBASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpsf7Q8BTV2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Gm8318-201ENSMUST00000182954 872 ntBASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cpsf7Q8BTV2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Gm8344-201ENSMUST00000119813 856 ntBASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Mir3081-201ENSMUST00000175305 84 ntBASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.03■□□□□ -0
Cpsf7Q8BTV2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cpsf7Q8BTV2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms